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A 72-membered combinatorial library was
prepared using the reaction sequence shown below.

The following amines were selected:
|
amine 1 |
amine 2 |
 |
 |
The library was prepared on a 0.05 mmolar
scale. Thus, 3-chlorosulfonyl-benzoic acid was reacted with a
threefold excess of amine 1 in ethyl acetate as a solvent.
The reaction mixture was washed with 0.5M H2SO4
and H2O and dried with MgSO4 to yield a
solution containing the sulfonamide intermediate.
One equivalent of carbonyldiimidazol was added to provide the
activated acid which was subsequently reacted with one equivalent
of amine 2. After extraction with 0.5M H2SO4,
H2O and 1M K2CO3 (basic compounds
H2O and 1M K2CO3) the
ethyl acetate was allowed to evaporate and the crude products were
purified by FlashTube chromatography as follows:
TLC analysis showed that the neutral products had Rf values
ranging from 0.1 to 0.6 in ethyl acetate/heptane (8:2) on silica,
whereas the products having a basic nitrogen had Rf values around
0.4 in ethyl acetate/ethanol/triethylamine (7:3:0.5). These
solvent systems were used to purify all library compounds using
FlashTube 2002, which is packed with 2.0g of silica.
The columns were wetted with 0.3ml of eluent and the sample
added in ~ 0.2ml of solvent. Another 0.1ml of eluent was added to
wash down the sample and finally 2ml of eluent was used to develop
the columns. These were subsequently examined in UV light and the
position of the product was marked. The piece of column holding
the product was cut out using the FlashTube Cutter and left in a
plastic reservoir equipped with a filter (<10µ) and a valve.
Several purifications were done in parallel and the entire library
could thus be purified in less than 2.5 hrs.
The silica plug was allowed to dry over night to simplify
removal of the polyethylene tube before extraction with
chloroform/methanol (8:2). No suction was applied during
filtration in order to avoid particles coming through the filter.
The silica can alternatively be removed by centrifugation.
All compounds were obtained completely pure as seen from TLC
and in yields between 30 - 50%.
Today purification is a bottleneck in combinatorial chemistry
and parallel synthesis. As shown here, FlashTubeTM
chromatography offers a simple, rapid and efficient solution. Pure
compounds is an important feature of a high quality chemical
library.
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